Index

C

convert_image_to_vtk() (in module lsmgridtrack.image) convert_kinematics_to_pandas() (in module lsmgridtrack.kinematics)

convert_kinematics_to_vtk() (in module lsmgridtrack.kinematics) convert_vtk_to_dataframe() (in module lsmgridtrack.postprocessing) create_registration() (in module lsmgridtrack.registration)

D

deformed_landmarks (lsmgridtrack.config.RegistrationOptions attribute)

divisions (lsmgridtrack.config.GridOptions attribute)

G

get_kinematics() (in module lsmgridtrack.kinematics) (in module lsmgridtrack.kinematics2d) get_sample_surface2d() (in module lsmgridtrack.image) get_sample_surface3d() (in module lsmgridtrack.image)

globally_transform_2d() (in module lsmgridtrack.postprocessing) globally_transform_3d() (in module lsmgridtrack.postprocessing) globally_transform_dataframe_3d() (in module lsmgridtrack.postprocessing) globally_transform_polydata_coordinates_3d() (in module lsmgridtrack.postprocessing) GridOptions (class in lsmgridtrack.config)

I

ImageOptions (class in lsmgridtrack.config)

iterations (lsmgridtrack.config.RegistrationOptions attribute)

K

Kinematics (class in lsmgridtrack.kinematics) (class in lsmgridtrack.kinematics2d)

L

lsmgridtrack.config module lsmgridtrack.image module lsmgridtrack.kinematics module

lsmgridtrack.kinematics2d module lsmgridtrack.postprocessing module lsmgridtrack.registration module

M

method (lsmgridtrack.config.RegistrationOptions attribute) metric (lsmgridtrack.config.RegistrationOptions attribute) module lsmgridtrack.config lsmgridtrack.image lsmgridtrack.kinematics lsmgridtrack.kinematics2d lsmgridtrack.postprocessing lsmgridtrack.registration

O

Options (class in lsmgridtrack.config)

origin (lsmgridtrack.config.GridOptions attribute)

P

parse_config() (in module lsmgridtrack.config)

parse_image_file() (in module lsmgridtrack.image) parse_image_sequence() (in module lsmgridtrack.image)

R

read_stl() (in module lsmgridtrack.postprocessing) read_vtk_grid() (in module lsmgridtrack.postprocessing) read_vtk_surface() (in module lsmgridtrack.postprocessing) reference_landmarks (lsmgridtrack.config.RegistrationOptions attribute) register() (in module lsmgridtrack.registration)

RegistrationOptions (class in lsmgridtrack.config) RegMethodEnum (class in lsmgridtrack.config) RegMetricEnum (class in lsmgridtrack.config) RegSamplingEnum (class in lsmgridtrack.config) resampling (lsmgridtrack.config.ImageOptions attribute)

S

sampling_fraction (lsmgridtrack.config.RegistrationOptions attribute) sampling_strategy (lsmgridtrack.config.RegistrationOptions attribute) save_transform() (in module lsmgridtrack.registration) shrink_levels (lsmgridtrack.config.RegistrationOptions attribute)

sigma_levels (lsmgridtrack.config.RegistrationOptions attribute) spacing (lsmgridtrack.config.ImageOptions attribute) surface_axis (lsmgridtrack.config.ImageOptions attribute) SurfaceAxis2D (class in lsmgridtrack.config) SurfaceAxis3D (class in lsmgridtrack.config)

T

transform_dataframe_to_local_csys_3d() (in module lsmgridtrack.postprocessing)

transform_to_local_csys_2d() (in module lsmgridtrack.postprocessing) transform_to_local_csys_3d() (in module lsmgridtrack.postprocessing)

U

upper_bound (lsmgridtrack.config.GridOptions attribute)

W

write_dataframe_to_excel() (in module lsmgridtrack.postprocessing) write_image_as_nii() (in module lsmgridtrack.image) write_image_as_vtk() (in module lsmgridtrack.image) write_kinematics_to_excel() (in module lsmgridtrack.kinematics)

write_kinematics_to_vtk() (in module lsmgridtrack.kinematics) write_to_vtk() (in module lsmgridtrack.kinematics) write_to_vtk_grid() (in module lsmgridtrack.postprocessing) write_to_vtk_image_data() (in module lsmgridtrack.postprocessing) write_to_vtk_polydata() (in module lsmgridtrack.postprocessing)